Article Archive
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GRASS for Rapid Reannotation of RNAseq Data
- annotation
- graph
Lior Pachter's Zika Paper
- kallisto
- sleuth
Oases Transcriptome Assembler
- transcriptome assembly
- oases
- velvet
- RNAseq
Can Trinity be Used for Genome Assembly?
- Trinity
- genome assembly
K-mer Distribution of a Transcriptome
- de-bruijn
- transcriptome assembly
- K-mer
Output of Oases Transcriptome Assembler
- de-bruijn
- transcriptome assembly
- oases
- velvet
Explaining Output of Trinity Component - Inchworm
- de-bruijn
- transcriptome assembly
- Trinity
- inchworm
Trinity and Contrail for Color Space
- de-bruijn
- transcriptome assembly
- Trinity
- genome assembly
- color space
- contrail
- hadoop
De Novo Transcriptome Assemblers – Oases, Trinity, etc. – IV
- de-bruijn
- transcriptome assembly
- oases
- Trinity
De Novo Transcriptome Assemblers – Oases, Trinity, etc. – III
- de-bruijn
- transcriptome assembly
- oases
- velvet
- Trinity
De Novo Transcriptome Assemblers – Oases, Trinity, etc. - II
- de-bruijn
- transcriptome assembly
- oases
- velvet
- Trinity
De Novo Transcriptome Assemblers - Oases, Trinity, etc.
- de-bruijn
- transcriptome assembly
- oases
- velvet
- Trinity
A Road Map for our Journey through the Transcriptomic Maze
- introductory
- bioinformatics