LINKS - Long Interval Nucleotide K-mer Scaffolder

LINKS - Long Interval Nucleotide K-mer Scaffolder


Link (h/t: @rayanchikhi)

LINKS is a genomics application for scaffolding or re-scaffolding genome assemblies with long reads, such as those produced by Oxford Nanopore Technologies Ltd. It provides a generic framework for scaffolding and can work on any sequences. Fill gaps in LINKS-derived scaffolds using Sealer (http://www.bcgsc.ca/platform/bioinfo/software/sealer).



Written by M. //