In this tutorial, we will start with a specific set of data and assemble the genome of a south American fish.
1 lane of Illumina GA2 | 37M of 73nt single end reads |
3 lanes of Illumina HiSEQ | 600M of 99nt paired end reads (225nt insert size) |
3 lanes of Illumina HiSEQ | 830M of 51 nt mate pair reads (2K insert size) |
454 | 2.5M mate pair reads (7.5K insert size) |
Pacific Bio | 10 SMRT cells |