<A href=https://github.com/PacificBiosciences/blasr>BLASR Aligner from PacBio</A>
<A href=https://github.com/PacificBiosciences/Bioinformatics-Training/wiki/HGAP>HGAP Assembler from PacBio</A>
<A href=https://github.com/PacificBiosciences/pbdagcon>PBDAG-con from PacBio</A>
<A href=https://github.com/PacificBiosciences/GenomicConsensus>GenomicConsensus/Quiver from PacBio</A>
<A href=https://code.google.com/p/pbsim/>PBSIM - Read Simulator Y. Ono</a>
<A href=http://sourceforge.net/projects/pb-jelly/>PB-Jelly from Baylor</A>
<A href=http://sourceforge.net/apps/mediawiki/wgs-assembler/index.php?title=PacBioToCA>PacBioToCA for Read Correction from S. Koren</A>
<A href=http://www.stanford.edu/~kinfai/LSC/LSC_cfg.html>LSC for Read Correction from K. Fai</A>
Computational notes - <A href=http://www.homolog.us/blogs/blog/2013/06/07/notes-on-pacbio-assembly-of-plasmodium-3d7/>http://www.homolog.us/blogs/blog/2013/06/07/notes-on-pacbio-assembly-of-plasmodium-3d7/</A>