biopython v1.71.0 Bio.Affy.CelFile.Record
Stores the information in a cel file.
Example usage:
>>> from Bio.Affy import CelFile
>>> with open("Affy/affy_v3_example.CEL", "r") as handle:
... c = CelFile.read(handle)
...
>>> print(c.ncols, c.nrows)
5 5
>>> print(c.intensities)
[[ 234. 170. 22177. 164. 22104.]
[ 188. 188. 21871. 168. 21883.]
[ 188. 193. 21455. 198. 21300.]
[ 188. 182. 21438. 188. 20945.]
[ 193. 20370. 174. 20605. 168.]]
>>> print(c.stdevs)
[[ 24. 34.5 2669. 19.7 3661.2]
[ 29.8 29.8 2795.9 67.9 2792.4]
[ 29.8 88.7 2976.5 62. 2914.5]
[ 29.8 76.2 2759.5 49.2 2762. ]
[ 38.8 2611.8 26.6 2810.7 24.1]]
>>> print(c.npix)
[[25 25 25 25 25]
[25 25 25 25 25]
[25 25 25 25 25]
[25 25 25 25 25]
[25 25 25 25 25]]
Link to this section Summary
Functions
Initialize class
Link to this section Functions
Link to this function
__init__()
Initialize class.