biopython v1.71.0 Bio.Phylo.PhyloXML.ProteinDomain
Represents an individual domain in a domain architecture.
The locations use 0-based indexing, as most Python objects including SeqFeature do, rather than the usual biological convention starting at 1. This means the start and end attributes can be used directly as slice indexes on Seq objects.
:Parameters:
start : non-negative integer
start of the domain on the sequence, using 0-based indexing
end : non-negative integer
end of the domain on the sequence
confidence : float
can be used to store e.g. E-values
id : string
unique identifier/name
Link to this section Summary
Functions
Initialize value for a ProteinDomain object
Create a SeqFeature from the ProteinDomain Object
Link to this section Functions
Link to this function
__init__()
Initialize value for a ProteinDomain object.
Link to this function
to_seqfeature()
Create a SeqFeature from the ProteinDomain Object.