biopython v1.71.0 Bio.ExPASy.ScanProsite

Execute a ScanProsite search.

Arguments:

  • mirror: The ScanProsite mirror to be used (default: https://www.expasy.org).
  • seq: The query sequence, or UniProtKB (Swiss-Prot, TrEMBL) accession
  • output: Format of the search results (default: xml)

Further search parameters can be passed as keywords; see the documentation for programmatic access to ScanProsite at https://www.expasy.org/tools/scanprosite/ScanPrositeREST.html for a description of such parameters.

This function returns a handle to the search results returned by ScanProsite. Search results in the XML format can be parsed into a Python object, by using the Bio.ExPASy.ScanProsite.read function.

Link to this section Summary

Functions

Parse search results returned by ScanProsite into a Python object

Link to this section Functions

Parse search results returned by ScanProsite into a Python object.