biopython v1.71.0 Bio.Phylo.NeXMLIO.Writer

Based on the writer in Bio.Nexus.Trees (str, to_string).

Link to this section Summary

Functions

Initialize parameters for NeXML writer

Recursively process tree, adding nodes and edges to Tree object

Create new labels for the NeXML writer

Write this instance’s trees to a file handle

Link to this section Functions

Initialize parameters for NeXML writer.

Recursively process tree, adding nodes and edges to Tree object.

Returns a set of all OTUs encountered.

Create new labels for the NeXML writer.

Write this instance’s trees to a file handle.