biopython v1.71.0 Bio.Phylo.NeXMLIO.Writer
Based on the writer in Bio.Nexus.Trees (str, to_string).
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Functions
Initialize parameters for NeXML writer
Recursively process tree, adding nodes and edges to Tree object
Create new labels for the NeXML writer
Write this instance’s trees to a file handle
Link to this section Functions
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__init__()
Initialize parameters for NeXML writer.
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_write_tree()
Recursively process tree, adding nodes and edges to Tree object.
Returns a set of all OTUs encountered.
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new_label()
Create new labels for the NeXML writer.
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write()
Write this instance’s trees to a file handle.