biopython

v1.71.0

biopython v1.71.0 Bio.Emboss.Applications.SeqmatchallCommandline

Commandline object for the seqmatchall program from EMBOSS

e.g.

 >>> cline = SeqmatchallCommandline(sequence="opuntia.fasta", outfile="opuntia.txt")
 >>> cline.auto = True
 >>> cline.wordsize = 18
 >>> cline.aformat = "pair"
 >>> print(cline)
 seqmatchall -auto -outfile=opuntia.txt -sequence=opuntia.fasta -wordsize=18 -aformat=pair

Link to this section Summary

Functions

__init__()

Initialize the class

Link to this section Functions

Link to this function __init__()

Initialize the class.