biopython v1.71.0 Bio.PDB.HSExposure.ExposureCN
Residue exposure as number of CA atoms around its CA atom.
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Functions
Initialize
Link to this section Functions
Link to this function
__init__()
Initialize.
A residue’s exposure is defined as the number of CA atoms around that residues CA atom. A dictionary is returned that uses a L{Residue} object as key, and the residue exposure as corresponding value.
:param model: the model that contains the residues :type model: L{Model}
:param radius: radius of the sphere (centred at the CA atom) :type radius: float
:param offset: number of flanking residues that are ignored in
the calculation of the number of neighbors
:type offset: int