biopython v1.71.0 Bio.Nexus.Nexus.CharBuffer

Helps reading NEXUS-words and characters from a buffer (semi-PRIVATE).

This class is not intended for public use (any more).

Link to this section Summary

Initialize the class

Iterates over NEXUS characters in the file

next()

Deprecated Python 2 style alias for Python 3 style next method

Checks for next non whitespace character in NEXUS file

Keeps iterating the NEXUS file until it reaches a target character

Return the next NEXUS word from a string

Returns a word stored in the buffer

rest()

Return the rest of the string without parsing

Skips whitespace characters in NEXUS file

__init__()

Initialize the class.

__next__()

Iterates over NEXUS characters in the file.

next()

Deprecated Python 2 style alias for Python 3 style next method.

next_nonwhitespace()

Checks for next non whitespace character in NEXUS file.

next_until()

Keeps iterating the NEXUS file until it reaches a target character.

Returns the word found in the NEXUS file.

next_word()

Return the next NEXUS word from a string.

This deals with single and double quotes, whitespace and punctuation.

peek_word()

Returns a word stored in the buffer.

rest()

Return the rest of the string without parsing.

skip_whitespace()

Skips whitespace characters in NEXUS file.