biopython v1.71.0 Bio.SCOP.Des.Record

Holds information for one node in the SCOP hierarchy.

Attributes:

  • sunid - SCOP unique identifiers
  • nodetype - One of ‘cl’ (class), ‘cf’ (fold), ‘sf’ (superfamily), ‘fa’ (family), ‘dm’ (protein), ‘sp’ (species), ‘px’ (domain). Additional node types may be added.
  • sccs - SCOP concise classification strings. e.g. b.1.2.1
  • name - The SCOP ID (sid) for domains (e.g. d1anu1), currently empty for other node types
  • description - e.g. “All beta proteins”,”Fibronectin type III”,

Link to this section Summary

Functions

Initialize the class

Parses DES records

Link to this section Functions

Initialize the class.

Parses DES records.

Records consist of 5 tab deliminated fields, sunid, node type, sccs, node name, node description.